This page contains helpful information about how to run Nextflow workflows on One Codex.
"complete": true
) but not successful ("success": false
) in the json details for the workflow (accessible via https://app.onecodex.com/api/v1/analyses/[workflow_run_UUID]
, using the unique identifier for this attempt of your workflow run).
For failed workflows, we retain the logs & output files temporarily (7 days after creation), so that you can explore the point of failure in your pipeline. You can access these files by appending /files
to the above URL (i.e.https://app.onecodex.com/api/v1/analyses/[workflow_run_UUID]/files
). The resulting json will list the available files as keys, and their temporary storage location (pre-signed URL) as values, so that you can download the required files.