Property | Description |
---|---|
n_mapped integer | The number of reads that were successfully mapped to a gene family or pathway. |
n_reads integer | The number of reads present in the sample. |
table array | An array of objects consisting of individual functional groups (format below). |
table
array contains results for a single functional group and metric, and also includes taxonomic information.
Each object in the array has the following fields:
Property | Description |
---|---|
id string | A group-specific unique ID, e.g., GO:0006096, PF16874, COG0148. |
name string | The name of the function. |
value number | Gene family or pathway abundance in the specified metric . |
taxon_id string | The NCBI taxonomy ID for the organism associated with this function. |
taxon_name string | The name of the organism. |
Warning: The above JSON format is specific to the current version of the functional analysis job. This format is stable and guaranteed to remain stable for this version of the job. However, future versions of the functional analysis job may alter the format or introduce new changes. Please use caution and include fallbacks when writing non-exploratory code using the above route. Please also feel free to reach out if you’d like to discuss this format and any forthcoming changes with us.